comparison fasta_add_barcode.xml @ 2:2ca5fde7a2bb draft default tip

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/fasta_add_barcode commit e857f7126443e115f11954085423f8999bc870aa-dirty

1:0ea7700e08ba

<tool id="fasta_add_barcode" name="Add barcodes" version="1.0">

    <description>to FASTA sequences</description>

    <requirements>
        <requirement type='package' version="1.0">fasta_add_barcode</requirement>
    </requirements>

    <stdio>
    </stdio>

            label="Sequences with added barcodes from ${on_string}" />
    </outputs>

    <tests>
        <test>
            <param name="sequence_file" value="input_sequence_file"/>
            <param name="mapping_file" value="mapping_file"/>
            <param name="output_sequence_file" value="output_sequence_file" />
        </test>
    </tests>

    <help><![CDATA[

**What it does**

This tool takes a FASTA file and add at the beginning of each sequence a barcode.
The barcode of each sequence is determined given sequence identifier and the mapping 
file.

]]>
    </help>

    <citations>

2:2ca5fde7a2bb

<tool id="fasta_add_barcode" name="Add barcodes" version="1.0">

    <description>to FASTA sequences</description>

    <requirements>
    </requirements>

    <stdio>
    </stdio>

            label="Sequences with added barcodes from ${on_string}" />
    </outputs>

    <tests>
        <test>
            <param name="sequence_file" value="input_sequences.fasta"/>
            <param name="mapping_file" value="mapping_file.txt"/>
            <output name="output_sequence_file" file="output_test.fasta" />
        </test>
    </tests>

    <help><![CDATA[

**What it does**

This tool takes a FASTA file and add at the beginning of each sequence a barcode.

The barcode of each sequence is determined given its sequence identifier. The mapping between sequence identifier and corresponding barcode is defined inside the mapping file. This file must be a tabular delimited file with two columns: the first with sequence identifiers and the second the corresponding barcode.

]]>
    </help>

    <citations>