Mercurial > repos > bebatut > extract_min_max_lines

comparison extract_min_max_lines.xml @ 1:07c9ae09ae38 draft default tip

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planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/extract_min_max_lines commit 718c006213709b631862b8d6d655fafc92e79ef7-dirty
author bebatut
date Fri, 15 Apr 2016 07:58:25 -0400
parents 42e4aee6b1fa
children
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0:42e4aee6b1fa 1:07c9ae09ae38
1 <tool id="extract_min_max_lines" name="Extract lines corresponding" version="0.1.0"> 1 <tool id="extract_min_max_lines" name="Extract lines corresponding" version="0.1.0">
2 <description>with minimum and maximum values of a column</description> 2 <description>to minimum and maximum values of a column</description>
3 3
4 <requirements> 4 <requirements>
5 </requirements> 5 </requirements>
6 6
7 <stdio> 7 <stdio>
35 <data name="output_file" format="tabular" 35 <data name="output_file" format="tabular"
36 label="${tool.name} on ${on_string}: Extracted lines" /> 36 label="${tool.name} on ${on_string}: Extracted lines" />
37 </outputs> 37 </outputs>
38 38
39 <tests> 39 <tests>
40 <test>
41 <param name="input_file" value="input_file.tabular"/>
42 <param name="column_id" value="3"/>
43 <param name="extraction_type" value="min"/>
44 <param name="extraction_nb" value="10"/>
45 <output name="output_file" file="output_test_col_3_min.tabular"/>
46 </test>
47 <test>
48 <param name="input_file" value="input_file.tabular"/>
49 <param name="column_id" value="3"/>
50 <param name="extraction_type" value="max"/>
51 <param name="extraction_nb" value="10"/>
52 <output name="output_file" file="output_test_col_3_max.tabular"/>
53 </test>
54 <test>
55 <param name="input_file" value="input_file.tabular"/>
56 <param name="column_id" value="4"/>
57 <param name="extraction_type" value="min"/>
58 <param name="extraction_nb" value="10"/>
59 <output name="output_file" file="output_test_col_4_min.tabular"/>
60 </test>
61 <test>
62 <param name="input_file" value="input_file.tabular"/>
63 <param name="column_id" value="4"/>
64 <param name="extraction_type" value="max"/>
65 <param name="extraction_nb" value="10"/>
66 <output name="output_file" file="output_test_col_4_max.tabular"/>
67 </test>
40 </tests> 68 </tests>
41 69
42 <help><![CDATA[ 70 <help><![CDATA[
43 **What it does** 71 **What it does**
44 72
45 This tool extract lines from a tabular file corresponding to minimum or maximum values of a column. 73 This tool extract a variable number of lines corresponding to minimum or maximum values of a chosen column.
46 74
75 The file must be in tabular format with tabular separated columns. To chosen column to extract minimum or maximum values must be data columns.
47 ]]></help> 76 ]]></help>
48 77
49 <citations> 78 <citations>
50 </citations> 79 </citations>
51 </tool> 80 </tool>