Mercurial > repos > bebatut > data_manager_metaphlan2_database_downloader

changeset 20:56cd4020f05a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit b'3deaa3adf381c1f3f6134ef6a36074d443f7e3fc\n'-dirty
author bebatut
date Wed, 01 Mar 2017 09:47:08 -0500
parents 89f4ceaba5bf
children d77a7bd60154
files data_manager/data_manager_metaphlan2_download.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/data_manager_metaphlan2_download.py	Wed Mar 01 09:34:48 2017 -0500
+++ b/data_manager/data_manager_metaphlan2_download.py	Wed Mar 01 09:47:08 2017 -0500
@@ -99,7 +99,7 @@
     db_dir = os.path.join(target_dir, build)
     subprocess.check_call(cmd, shell=True)
     print(os.listdir(target_dir))
-    os.rename("db_v20", build, src_dir_fd=target_dir, dst_dir_fd=target_dir)
+    os.rename(os.path.join(target_dir,"db_v20"), db_dir)
     print(os.listdir(target_dir))
     add_data_table_entry(
         data_tables,