Mercurial > repos > bebatut > data_manager_metaphlan2_database_downloader

view data_manager_conf.xml @ 0:1a5151add645 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/data_managers/data_manager_metaphlan2_database_downloader commit d474c6ecde051fa66db3635ba28bbbf28623cfdc-dirty
author bebatut
date Tue, 21 Feb 2017 04:17:13 -0500
parents
children 27d7d61ca8df
line wrap: on
line source

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/data_manager_metaphlan2_download.xml" id="data_manager_metaphlan2_download" >
        <data_table name="metaphlan2_database">  <!-- Defines a Data Table to be modified. -->
            <output> <!-- Handle the output of the Data Manager Tool -->
                <column name="value" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">metaphlan2/data/${dbkey}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/metaphlan2/data/${dbkey}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>