# HG changeset patch # User bcrain-completegenomics # Date 1347300743 14400 # Node ID 982e19c29ec0fe6b6faeafd31db8444640bf47c7 # Parent c877b14b262cc1c19eb640bc013786a54c3b912e Uploaded diff -r c877b14b262c -r 982e19c29ec0 cgatools/cg_crr_files.loc.sample --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cgatools/cg_crr_files.loc.sample Mon Sep 10 14:12:23 2012 -0400 @@ -0,0 +1,17 @@ +#This is a sample file distributed with cgatools repository that enables the cgatools +#functions to use the .crr reference files. After installation download the reference +#genome files form Complete Genomics' ftp site: +#ftp://ftp.completegenomics.com/ReferenceFiles/build37.crr +#ftp://ftp.completegenomics.com/ReferenceFiles/build36.crr +#and edit the path for the reference genomes to correspond to their location. +# +#Restart your Galaxy instance to ensure the file locations are registered with Galaxy +#properly. +# +#The cg_crr_files.loc file has this format (white space characters are TAB characters): +# +# +# +#hg19 hg19 build 37 /absolute/path/to/build37.crr +#hg18 hg18 build 36 /absolute/path/to/build36.crr + diff -r c877b14b262c -r 982e19c29ec0 cgatools/tool-data/cg_crr_files.loc.sample --- a/cgatools/tool-data/cg_crr_files.loc.sample Mon Sep 10 12:39:32 2012 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,17 +0,0 @@ -#This is a sample file distributed with cgatools repository that enables the cgatools -#functions to use the .crr reference files. After installation download the reference -#genome files form Complete Genomics' ftp site: -#ftp://ftp.completegenomics.com/ReferenceFiles/build37.crr -#ftp://ftp.completegenomics.com/ReferenceFiles/build36.crr -#and edit the path for the reference genomes to correspond to their location. -# -#Restart your Galaxy instance to ensure the file locations are registered with Galaxy -#properly. -# -#The cg_crr_files.loc file has this format (white space characters are TAB characters): -# -# -# -#hg19 hg19 build 37 /absolute/path/to/build37.crr -#hg18 hg18 build 36 /absolute/path/to/build36.crr -