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1 #This is a sample file distributed with cgatools repository that enables the cgatools
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2 #functions to use the .crr reference files. After installation download the reference
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3 #genome files form Complete Genomics' ftp site:
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4 #ftp://ftp.completegenomics.com/ReferenceFiles/build37.crr
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5 #ftp://ftp.completegenomics.com/ReferenceFiles/build36.crr
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6 #and edit the path for the reference genomes to correspond to their location.
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7 #
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8 #Restart your Galaxy instance to ensure the file locations are registered with Galaxy
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9 #properly.
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10 #
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11 #The cg_crr_files.loc file has this format (white space characters are TAB characters):
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12 #
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13 #<value> <dbkey> <name> <path>
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14 #
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15 #hg19 hg19 build 37 /absolute/path/to/build37.crr
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16 #hg18 hg18 build 36 /absolute/path/to/build36.crr
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