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view classification-wrapper.sh @ 7:b6ece07bec6a draft

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planemo upload commit 45906ba522c7c319067e93d5cd5d7161223c3336
author bcclaywell
date Mon, 12 Oct 2015 15:59:59 -0400
parents d4690e65afcd
children
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#!/bin/bash

source $(dirname $0)/util.sh
source $1

classif_table.py \
    --specimen-map ${SPLIT_MAP} \
    --metadata-map ${LABEL_MAP} \
    --rank ${WANT_RANK} \
    --tallies-wide ${TALLIES_WIDE} \
    --by-specimen ${BY_SPECIMEN} \
    ${CLASS_DB} \
    ${BY_TAXON}