Mercurial > repos > bcclaywell > microbiome_pplacer_suite

annotate preprocessing-wrapper.sh @ 7:b6ece07bec6a draft

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planemo upload commit 45906ba522c7c319067e93d5cd5d7161223c3336
author bcclaywell
date Mon, 12 Oct 2015 15:59:59 -0400
parents 221a97bf686d
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 #!/bin/bash
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2
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3 source $1
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5 deduplicate_sequences.py \
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6 --split-map ${SPLIT_MAP} \
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7 --deduplicated-sequences-file ${DEDUP_INFO} \
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8 ${INPUT_SEQS} \
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9 ${DEDUP_SEQS}