Mercurial > repos > badger > trinityrnaseq
comparison trinityrnaseq.xml @ 10:40f2eee4f2e3 draft
add java dependency
| author | Eric Badger <badger@msi.umn.edu> |
|---|---|
| date | Thu, 03 Apr 2014 11:39:01 -0500 |
| parents | 09c1e388c20c |
| children | 2bc2f0d5e4e1 |
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| 9:09c1e388c20c | 10:40f2eee4f2e3 |
|---|---|
| 1 <tool id="trinityrnaseq" name="Trinity" version="0.0.2"> | 1 <tool id="trinityrnaseq" name="Trinity" version="0.0.2"> |
| 2 <!-- Written by Jeremy Goecks, now maintained here by bhaas --> | 2 <!-- Written by Jeremy Goecks, now maintained here by bhaas --> |
| 3 <description>De novo assembly of RNA-Seq data Using Trinity</description> | 3 <description>De novo assembly of RNA-Seq data Using Trinity</description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package">java</requirement> | |
| 5 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> | 6 <requirement type="package" version="2013_08_14">trinityrnaseq</requirement> |
| 6 <requirement type="package" version="0.1.19">samtools</requirement> | 7 <requirement type="package" version="0.1.19">samtools</requirement> |
| 7 <requirement type="package" version="1.0.0">bowtie</requirement> | 8 <requirement type="package" version="1.0.0">bowtie</requirement> |
| 8 </requirements> | 9 </requirements> |
| 9 <command> | 10 <command> |