Mercurial > repos > artbio > snvtocnv

diff sequenza_to_hrdtools_input.R @ 4:e299c477b475 draft

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"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/snvtocnv commit 10edea05400e21ba43942bd0cc582153d60ae2d9"
author artbio
date Sat, 20 Feb 2021 09:10:06 +0000
parents 0e54da14f831
children e66b91475343
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--- a/sequenza_to_hrdtools_input.R	Fri Feb 19 15:22:05 2021 +0000
+++ b/sequenza_to_hrdtools_input.R	Sat Feb 20 09:10:06 2021 +0000
@@ -30,8 +30,8 @@
 opt <- parse_args(OptionParser(option_list = option_list),
                  args = commandArgs(trailingOnly = TRUE))
 
-sequenza_data <- as.tibble(read.delim(opt$input, header = TRUE))
-solutions_data <- as.tibble(read.delim(opt$solutions, header = TRUE))
+sequenza_data <- as_tibble(read.delim(opt$input, header = TRUE))
+solutions_data <- as_tibble(read.delim(opt$solutions, header = TRUE))
 
 
 ploidy <- round(solutions_data$ploidy[1])