Mercurial > repos > artbio > sambamba
diff test-data/c1215_fixmate_sampled.sam @ 2:b13eb145dbd0 draft
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sambamba commit ea1ce99d707fcf2d64f6f2cd96fdd1754f344df1"
| author | artbio |
|---|---|
| date | Thu, 30 Dec 2021 02:05:42 +0000 |
| parents | ee0ecf06dd21 |
| children |
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--- a/test-data/c1215_fixmate_sampled.sam Mon May 25 21:09:55 2020 +0000 +++ b/test-data/c1215_fixmate_sampled.sam Thu Dec 30 02:05:42 2021 +0000 @@ -1,5 +1,5 @@ @HD VN:1.3 SO:coordinate -@PG ID:sambamba CL:view -h -t 1 -f sam --subsampling-seed=123 -s 0.1 -o /tmp/tmpsodu2dip/files/2/b/e/dataset_2be4d6d2-9c36-480e-a69b-61d0f4ba66d5.dat input.bam VN:1.0 +@PG ID:sambamba CL:view -h -t 1 -f sam --subsampling-seed=123 -s 0.1 -o /tmp/tmp1mtgiw55/files/1/2/e/dataset_12e22434-7749-4511-b122-b93c9487e848.dat input.bam VN:1.0 AL096846_2_151_2180 99 AL096846 2 60 35M = 117 150 ATATATAATTTAATAAATACATTCCGACGATACTG <<<<<<<<<<<<<<<:(<<<<<<<<<<:<<:5<;; XT:A:U NM:i:0 X0:i:1 X1:i:0 XM:i:0 XO:i:0 XG:i:0 MD:Z:35 AL096846_11_168_117e 163 AL096846 11 60 35M = 134 158 TTAATAAATACATTCCGACGATACTGCCTCTATGG <<<<<<<<<<<<<<,2<<<<<<<<<<7<<<:<<<6 XT:A:U NM:i:0 X0:i:1 X1:i:0 XM:i:0 XO:i:0 XG:i:0 MD:Z:35 AL096846_15_201_212 163 AL096846 15 60 35M = 167 187 TAAATACATTCCGACGATACTGCCTCTATGGCTTA 8:<<<<<<<<<<;<<<;;<<<<<<<994<);<<29 XT:A:U NM:i:0 X0:i:1 X1:i:0 XM:i:0 XO:i:0 XG:i:0 MD:Z:35