# HG changeset patch
# User artbio
# Date 1522248208 14400
# Node ID 0fa0c1132a7b03e2e3275120ceead93e8f09c970
# Parent  9c7c44935bf16107c469e72779164421498e9a60
planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 3f67b2cf90a5de9880c98a6e492c444a5c856275

diff -r 9c7c44935bf1 -r 0fa0c1132a7b rsem.xml
--- a/rsem.xml	Wed Mar 28 09:42:58 2018 -0400
+++ b/rsem.xml	Wed Mar 28 10:43:28 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="rsem" name="RSEM" version="0.3.0">
+<tool id="rsem" name="RSEM" version="0.3.1">
   <description></description>
     <macros>
         <import>macros.xml</import>
@@ -54,7 +54,7 @@
           ln -f -s '$run_rsem.input.fastq.singlefastq' 'uncomp_single.fastq' &&
         #end if
       #elif $run_rsem.input.fastq.matepair=="paired":
-        #if $run_rsem.input.fastq.singlefastq.is_of_type('fastq.gz') or $run_rsem.input.fastq.singlefastq.is_of_type('fastqsanger.gz'):
+        #if $run_rsem.input.fastq.fastq1.is_of_type('fastq.gz') or $run_rsem.input.fastq.fastq1.is_of_type('fastqsanger.gz'):
           gunzip < '$run_rsem.input.fastq.fastq1' > uncomp_pair1.fastq &&
           gunzip < '$run_rsem.input.fastq.fastq2' > uncomp_pair2.fastq &&
         #elif $run_rsem.input.fastq.singlefastq.is_of_type('fastq') or $run_rsem.input.fastq.singlefastq.is_of_type('fastqsanger'):