Mercurial > repos > artbio > high_dimensions_visualisation
changeset 1:5e4ec9397528 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/gsc_high_dimension_visualization commit 70c7abb20f76651e61325e3aa90809f6874f8b85
| author | artbio |
|---|---|
| date | Mon, 24 Jun 2019 07:16:30 -0400 |
| parents | 71e3b222516a |
| children | |
| files | high_dim_visu.R high_dim_visu.xml |
| diffstat | 2 files changed, 2 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/high_dim_visu.R Sun Jun 23 12:23:51 2019 -0400 +++ b/high_dim_visu.R Mon Jun 24 07:16:30 2019 -0400 @@ -228,6 +228,7 @@ rownames(contrasting_factor) <- contrasting_factor[,1] contrasting_factor <- contrasting_factor[colnames(data),] colnames(contrasting_factor) <- c("id","factor") + contrasting_factor$factor <- as.factor(contrasting_factor$factor) factorColors <- with(contrasting_factor, data.frame(factor = levels(factor),
--- a/high_dim_visu.xml Sun Jun 23 12:23:51 2019 -0400 +++ b/high_dim_visu.xml Mon Jun 24 07:16:30 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="high_dimensions_visualisation" name="Generate PCA, tSNE and HCPC" version="0.5.0"> +<tool id="high_dimensions_visualisation" name="Generate PCA, tSNE and HCPC" version="0.9.0"> <description>from highly dimensional expression data</description> <requirements> <requirement type="package" version="1.3.2=r3.3.2_0">r-optparse</requirement>