Mercurial > repos > artbio > get_reference_fasta
comparison get_reference_fasta.xml @ 1:4271ebf5a764 draft default tip
"planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/get_reference_fasta commit 51dc6c56c7d95fc229ffee958354211cd454fd36"
| author | artbio |
|---|---|
| date | Sun, 09 May 2021 17:05:00 +0000 |
| parents | e30b3bc5b344 |
| children |
comparison
equal
deleted
inserted
replaced
| 0:e30b3bc5b344 | 1:4271ebf5a764 |
|---|---|
| 1 <tool id="get_fasta_reference" name="get fasta reference" version="0.2.1"> | 1 <tool id="get_fasta_reference" name="get fasta reference" version="0.3.1"> |
| 2 <description>Obtain reference genome sequence</description> | 2 <description>Obtain reference genome sequence</description> |
| 3 <stdio> | 3 <stdio> |
| 4 <exit_code range="1:" /> | 4 <exit_code range="1:" /> |
| 5 </stdio> | 5 </stdio> |
| 6 <command><![CDATA[ | 6 <command><![CDATA[ |
| 19 <param name="pre_installed_fasta" value="EcR_USP_224.fa"/> | 19 <param name="pre_installed_fasta" value="EcR_USP_224.fa"/> |
| 20 <output name="output" file="EcR_USP_224.fa"/> | 20 <output name="output" file="EcR_USP_224.fa"/> |
| 21 </test> | 21 </test> |
| 22 </tests> | 22 </tests> |
| 23 <help><![CDATA[ | 23 <help><![CDATA[ |
| 24 Places the reference genome sequence in the current history. | 24 Places the galaxy instance pre-built genome index sequence in the current history. |
| 25 Useful for sharing purposes or tools that work directly on fasta files. | 25 Useful for sharing purposes or tools that work directly on fasta files. |
| 26 ]]></help> | 26 ]]></help> |
| 27 <citations> | 27 <citations> |
| 28 <citation type="doi">10.1186/gb-2010-11-8-r86</citation> | 28 <citation type="doi">10.1186/gb-2010-11-8-r86</citation> |
| 29 </citations> | 29 </citations> |