Mercurial > repos > anton > vcfbreakcreatemulti
changeset 1:cf6b34535a33 draft default tip
Uploaded
| author | anton |
|---|---|
| date | Tue, 10 Jun 2014 12:12:37 -0400 |
| parents | 448b21afcafa |
| children | |
| files | vcfbreakcreatemulti.xml |
| diffstat | 1 files changed, 5 insertions(+), 5 deletions(-) [+] |
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--- a/vcfbreakcreatemulti.xml Tue May 13 16:22:12 2014 -0400 +++ b/vcfbreakcreatemulti.xml Tue Jun 10 12:12:37 2014 -0400 @@ -1,4 +1,4 @@ -<tool id="vcfbreakcreatemulti" name="VCF-Break-Create-multi:" version="0.0.1"> +<tool id="vcfbreakcreatemulti" name="VCFbreakCreateMulti:" version="0.0.1"> <requirements> <requirement type="package" version="586c5ae5d57a38dae6b32ea831fb1f7cfa14c9bd">vcflib</requirement> </requirements> @@ -14,11 +14,11 @@ </command> <inputs> + <param format="vcf" name="input1" type="data" label="Select VCF dataset"/> <param name="break_or_create" type="select" display="radio" label="Break or Create?"> <option value="break">Break</option> <option value="create">Create</option> </param> - <param format="vcf" name="input1" type="data" label="In this VCF dataset"/> </inputs> <outputs> <data format="vcf" name="out_file1" /> @@ -37,10 +37,10 @@ </tests> <help> -This tool breaks or creates multiallelic VCF records based on user selection (**Break** or **Create**, respectively). +This tool breaks or creates multiallelic VCF records based on user selection (**Break** or **Create**, respectively): - - Breaking = If multiple alleles are specified in a single record, break the record into multiple lines, preserving allele-specific INFO fields. - - Creation = If overlapping alleles are represented across multiple records, merge them into a single record. + - **Break** = If multiple alleles are specified in a single record, break the record into multiple lines, preserving allele-specific INFO fields. + - **Create** = If overlapping alleles are represented across multiple records, merge them into a single record. ----