diff vcfaddinfo.xml @ 0:c9ed132d162f draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/vcfaddinfo.xml	Mon May 12 11:47:00 2014 -0400
@@ -0,0 +1,31 @@
+<tool id="vcfaddinfo" name="VCFaddinfo:" version="0.0.1">
+<requirements>
+    <requirement type="package" version="586c5ae5d57a38dae6b32ea831fb1f7cfa14c9bd">vcflib</requirement>
+</requirements>
+  <description>Adds info fields from the second dataset which are not present in the first dataset</description>
+  <command>vcfaddinfo "${input1}" "${input2}" > "${out_file1}"</command>
+  <inputs>
+    <param format="vcf" name="input1" type="data" label="Add INFO fields to" help="First VCF dataset"/>
+    <param format="vcf" name="input2" type="data" label="using INFO fields from" help="Second VCF dataset"/>
+  </inputs>
+  <outputs>
+    <data format="vcf" name="out_file1" />
+  </outputs>
+ <tests>
+    <test>
+      <param name="input1" value="vcfaddinfo-input1.vcf"/>
+      <param name="input2" value="vcflib.vcf"/>
+      <output name="out_file1" file="vcfaddinfo-test1.vcf" />
+    </test>
+    </tests>
+<help>
+
+Adds info fields from the second dataset which are not present in the first dataset.
+
+-----
+
+Vcfaddinfo is a part of **VCFlib** toolkit developed by Erik Garrison (https://github.com/ekg/vcflib).                                                                                                                                 
+
+
+</help>
+</tool>