Mercurial > repos > anmoljh > csv_to_rdata
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author | anmoljh |
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date | Wed, 18 Oct 2017 04:51:39 -0400 |
parents | 6b9d382cb4a5 |
children | 85944f34e129 |
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<tool id="csv2rdata" name="Prepare input file" version="1.0"> <description> This Tool Converts Input csv File into RData Which Is Further Used for Model Building </description> <requirements> <requirement type="package" version="3.2.1">R</requirement> </requirements> <stdio> <exit_code range="1:" /> </stdio> <command interpreter="Rscript">csv2rdata.R $file1 $RData </command> <inputs> <param name="file1" type="data" format="csv" label="Select file containing training data" help="CSV format" /> </inputs> <outputs> <data name="RData" format="data" label="Input.RData" /> </outputs> <tests> <test> <param name="file1" value="non_redundant.csv" /> <output name="RData" file="desc.RData" compare="sim_size" delta="50000" /> </test> </tests> <help> .. class:: infomark **Input "csv file" format must be as given below :** "",feature1,feaure2,feature3,..,activity cpd1,623,0.4,3.4,..,Active cpd2,234,0.9,5.6,..,Inactive cpd3,567,0.5,3.14,..,Active cpd4,231,0.1,1.2,..,Inactive here "cpd" stands for name or id of a compound. It is rowname with no column header. </help> </tool>