diff scripts/S01b_study_seq_composition_aa.py @ 4:5766f80370e7 draft

planemo upload for repository htpps://github.com/abims-sbr/adaptearch commit 17acd02c547bd1f7661a846661aa99de9743efe9

--- a/scripts/S01b_study_seq_composition_aa.py	Wed Jan 17 11:35:37 2018 -0500
+++ b/scripts/S01b_study_seq_composition_aa.py	Tue Feb 27 08:43:50 2018 -0500
@@ -545,19 +545,19 @@
             fileOUT_TotalPartialSpecificVolume.write("%.5f," %(Total_Partial_Specific_Volume))
             fileOUT_TotalHydratation.write("%.5f," % Total_Hydration)
         else:
-            fileOUT_PROT_ALL.write("%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_IVYWREL.write("%s,%s," %("n.a", "n.a"))
-            fileOUT_ERK_DNQTSH.write("%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_EK_QH.write("%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_FYMINK_GARP.write("%s,%s,%s,%s," %("n.a","n.a","n.a","n.a"))
-            fileOUT_AVLIMFYW.write("%s,%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_STNQ.write("%s,%s," %("n.a","n.a"))
-            fileOUT_RHKDE.write("%s,%s,%s,%s,%s,%s,"%("n.a","n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_PAYRE.write("%s,%s,%s,%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a","n.a","n.a","n.a"))
-            fileOUT_TotalResidueWeight.write("%s," %"n.a")
-            fileOUT_TotalResidueVolume.write("%s," %"n.a")
-            fileOUT_TotalPartialSpecificVolume.write("%s," %"n.a")
-            fileOUT_TotalHydratation.write("%s," %"n.a")
+            fileOUT_PROT_ALL.write("%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA"))
+            fileOUT_IVYWREL.write("%s,%s," %("NA", "NA"))
+            fileOUT_ERK_DNQTSH.write("%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA"))
+            fileOUT_EK_QH.write("%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA"))
+            fileOUT_FYMINK_GARP.write("%s,%s,%s,%s," %("NA","NA","NA","NA"))
+            fileOUT_AVLIMFYW.write("%s,%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA","NA"))
+            fileOUT_STNQ.write("%s,%s," %("NA","NA"))
+            fileOUT_RHKDE.write("%s,%s,%s,%s,%s,%s,"%("NA","NA","NA","NA","NA","NA"))
+            fileOUT_PAYRE.write("%s,%s,%s,%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA","NA","NA","NA"))
+            fileOUT_TotalResidueWeight.write("%s," %"NA")
+            fileOUT_TotalResidueVolume.write("%s," %"NA")
+            fileOUT_TotalPartialSpecificVolume.write("%s," %"NA")
+            fileOUT_TotalHydratation.write("%s," %"NA")
         
     ## END LINE
     fileOUT_PROT_ALL.write("\n")