Mercurial > repos > abims-sbr > blastalign
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planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 38545eb765e0df7fcc6b8130e8e5f87cf4481122
| author | abims-sbr |
|---|---|
| date | Thu, 13 Apr 2017 05:47:47 -0400 |
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************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus1_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Am31/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus2_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Am21/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus3_sp2.fasta has 2 sequences and is 625 bytes (maximum number of sequences that will be used to search for the reference sequence is 1341) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 240 by aligning to sequence Ac231/11000366 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus4_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf81/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus5_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf91/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus6_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf61/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus7_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf41/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus8_sp2.fasta has 2 sequences and is 590 bytes (maximum number of sequences that will be used to search for the reference sequence is 1380) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus9_sp2.fasta has 2 sequences and is 361 bytes (maximum number of sequences that will be used to search for the reference sequence is 1765) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf101/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus10_sp2.fasta has 2 sequences and is 360 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 2 sequences and length 160 by aligning to sequence Pf51/11000160 (percentage of gaps in each sequence is less than 95%) ************************ BlastAlign ************************ This program takes nucleotide sequences in fasta format and returns a multiple alignment (in Nexus & Phylip formats) using BLASTN Will exclude sequences where gaps make up more than 95% of the sequence in the final alignment Input file ./locus1_sp3.fasta has 3 sequences and is 540 bytes (maximum number of sequences that will be used to search for the reference sequence is 1767) BlastAlign finished: it has produced a multiple alignment of 3 sequences and length 160 by aligning to sequence Pf71/11000160 (percentage of gaps in each sequence is less than 95%)