# HG changeset patch
# User peterjc
# Date 1365000470 14400
# Node ID 3d74c1176d6720f003c6e9ed0e1ed7f15342dc1f
# Parent  7c1eda453701844c7fdeb48e66d96446b70b3a8e
Uploaded minor fix

diff -r 7c1eda453701 -r 3d74c1176d67 tools/protein_analysis/psortb.py
--- a/tools/protein_analysis/psortb.py	Wed Apr 03 10:31:27 2013 -0400
+++ b/tools/protein_analysis/psortb.py	Wed Apr 03 10:47:50 2013 -0400
@@ -156,9 +156,10 @@
 
 out_handle = open(tabular_file, "w")
 out_handle.write("#%s\n" % "\t".join(header))
+count = 0
 for temp in temp_files:
     data_handle = open(temp)
-    count = clean_tabular(data_handle, out_handle)
+    count += clean_tabular(data_handle, out_handle)
     data_handle.close()
     if not count:
         clean_up(fasta_files + temp_files)
diff -r 7c1eda453701 -r 3d74c1176d67 tools/protein_analysis/psortb.xml
--- a/tools/protein_analysis/psortb.xml	Wed Apr 03 10:31:27 2013 -0400
+++ b/tools/protein_analysis/psortb.xml	Wed Apr 03 10:47:50 2013 -0400
@@ -41,6 +41,11 @@
   </requirements>
   <tests>
     <test>
+      <param name="sequence" value="empty.fasta" ftype="fasta"/>
+      <param name="long" value="terse"/>
+      <output name="outfile" file="empty_psortb_terse.tabular" ftype="tabular"/>
+    </test>
+    <test>
       <param name="sequence" value="k12_ten_proteins.fasta" ftype="fasta"/>
       <param name="long" value="terse"/>
       <output name="outfile" file="k12_ten_proteins_psortb_p_terse.tabular" ftype="tabular"/>