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UCSC Xena Server 0.2.0 documentation
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Table of Contents
ΒΆ
Introduction to UCSC Xena
Overview
Deployment scenarios
Single user
Organization
Cloud
Data Model
cgdata
The Xena Data Model
Field types
Float
Category
Gene
Position
Dataset Meta Data
probeMap
cohort
Dataset Loading
Input Formats
Command Line Tool
Overview
--no-serve
--no-auto
--host
--port
--load
[file
..]
--force
--json
--database
--logfile
--root
Web API
Relational Queries
Analytic Queries
Scheme Overview
Special Forms
fn
quote
let
if
Data Types
Functions
Math
Functional methods
Data Access
SQL Functions
Xena Web Console
UCSC Xena Server Design
Modules For Data Ingestion
Modules For Data Serving
Database backend: h2.clj
File readers, readers.clj
CGData
CGData probemap references
Xena Database Schema
Tables
dataset
field
field-score
scores
feature
code
field-position
field-gene
Schema In Detail
Client Libraries
Python
Internal API docs
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