view QCExporter.xml @ 0:3d84209d3178 draft

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<?xml version='1.0' encoding='UTF-8'?>
<tool id="QCExporter" name="QCExporter" version="1.12.0">
  <description>Will extract several qp from several run/sets in a tabular format.</description>
  <macros>
    <token name="@EXECUTABLE@">QCExporter</token>
    <import>macros.xml</import>
  </macros>
  <expand macro="stdio"/>
  <expand macro="requirements"/>
  <command>QCExporter

-in ${param_in}
-names ${param_names}
-mapping ${param_mapping}
-out_csv ${param_out_csv}
-threads \${GALAXY_SLOTS:-24} 
</command>
  <inputs>
    <param name="param_in" type="data" format="" optional="False" label="Input qcml file" help="(-in)"/>
    <param name="param_names" type="text" size="20" label="The name of the target runs or sets to be exported from. If empty, from all will be exported." help="(-names)"/>
    <param name="param_mapping" type="data" format="tabular" optional="False" label="The mapping of the exported table's headers to the according qp cvs. The first row is considered containing the headers as for the exported the table. The second row is considered the according qp cv accessions of the qp to be exported." help="(-mapping)"/>
  </inputs>
  <outputs>
    <data name="param_out_csv" label="Output csv formatted quality parameter." format="tabular"/>
  </outputs>
  <help>**What it does**

Will extract several qp from several run/sets in a tabular format.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCExporter.html

@REFERENCES@
</help>
</tool>